Fifteen people pose in two rose in front of a docked ship Lake Guardian

CSMI Erie 2024 crew

The Great Lakes Center is responsible for the largest benthic monitoring program in the Great Lakes region and one of the largest in the world.

Great Lakes Biological Monitoring Program

Project description

Despite great improvements in water quality in 1980s, Great Lakes ecosystems constantly face new challenges, including climate change and water level extremes, habitat destruction, spills and persistent toxic chemicals, threats to water quality, and invasive species introductions. Lake monitoring is essential to understand how biological communities respond to all these changes. Since 2012, the GLC and collaborators at Cornell University have participated in a long-term biological monitoring (LTM) program across all the Laurentian Great Lakes. The EPA Great Lakes National Program Office (GLNPO) Biology Monitoring Program is designed to provide managers and scientists across the Great Lakes access to biological data on chlorophyll, zooplankton, mysids, and benthos to support environmental decision-making and research.

In 2022, the team of GLC scientists led by Lyubov Burlakova and Alexander Karatayev were awarded $3 million from the EPA within the project “Great Lakes Biology Monitoring Program: Zooplankton, Mysis, and Benthic Components for 2022-2028” to conduct a benthic study of the Great Lakes. This project is a combination of a benthic assessment of EPA LTM stations and the Cooperative Science and Monitoring Initiative (CSMI) 5-year rotation of lakes. While the LTM requires sampling all five lakes at a few selected stations every year, the CSMI study focuses on an intensive survey of one lake per year. The amount of samples to be analyzed, the scope of the study, and the significance of the Great Lakes make us responsible for the largest benthic monitoring program in the Great Lakes region and one of the largest in the world.

We collect benthos (Buffalo State), zooplankton, and chlorophyll data (Cornell University) across the five Great Lakes, analyze this data, and make it available to environmental and fisheries managers. In addition to an annual survey of 57 long-term stations, a much more detailed survey is conducted on each lake every 5 years with the Coordinated Science and Monitoring Initiative (CSMI). We participated in CSMI surveys in 2014 (Lake Erie), 2015 (Lake Michigan), 2016 (Lake Superior), 2017 (Lake Huron), 2018 (Lake Ontario), 2019 (Lake Erie), 2021 (Lake Michigan), 2022 (Lake Huron and Lake Superior), and 2023 (Lake Ontario). Additional research projects include impact of dreissenids on the lower food web and benthic nepheloid layer, and development of remote sensing methods.

Project details

The current project is a continuation of the long-term monitoring of benthic invertebrates initiated by EPA in 1997, with the application of new sampling strategies and research projects:

  • Collection and analysis of benthic samples from the EPA LTM stations.
  • Collection and analysis of benthos from additional 60 - 80 stations during the CSMI.
  • Study Dreissena distribution and abundance using underwater video image analysis.
  • Study Great Lakes benthoscapes to investigate large scale changes in benthos composition and distribution affected by dreissenids and eutrophication.
  • Understand interactions between the benthic nepheloid layer and biota to assess changes in Great Lakes lower food web affected by dreissenids, climate change, and oligotrophication.

Project outcomes

  • Benthic samples from long-term monitoring stations collected in 2012-2022 were analyzed and data accepted by the EPA.
  • Conducted CSMI benthic surveys on all Great Lakes (2017-2023).
  • Developed a video image analysis method that increases the precision of the estimation of Dreissena distribution compared to traditional Ponar grabs.
  • Demonstrated that monitoring Dreissena distribution can be an effective tool for mapping the extent and frequency of hypoxia in freshwater.
  • Developed two new benthic indices for assessment of water quality.
  • Analyzed long-term data and revealed major drivers of benthic abundance and diversity across depths in lakes Michigan, Ontario and Erie.
  • Analyzed dynamics of Dreissena populations and identified the major drivers of Dreissena distribution and population sizes in all deep basins and in shallow bays of Great Lakes.
  • All results were presented at numerous scientific meetings, published in 23 peer-reviewed research papers, and submitted to environmental agencies to support decision-making and research.

CSMI Erie 2024

Great Lakes Benthic Invertebrate Guide

Photomicrograph of a slide mounted worm. The head has an eyespot and a proboscis. The first 4 segments have ventral chaetae but not dorsal chaetae.
Arcteonais lomondi, an oligochaete worm found in our samples.

The Guide was developed to support the EPA Long-term Benthic Monitoring Project and Cooperative Science and Monitoring Initiative. It is intended to be used in conjunction with relevant identification keys, to aid in the identification of aquatic invertebrates found in the benthos of the Great Lakes. This project is still in development, but eventually all of the species found in the EPA benthos samples will be represented in this guide. Microscope photos of relevant distinctive features will be on each species page to aid in identification.

Great Lakes Benthic Invertebrate Guide

Publications

Lake Erie and Lake Michigan Benthos: Cooperative Science and Monitoring Initiative - Final Report (2014 and 2015) (PDF, 3MB)

Lake Superior Benthos: Cooperative Science Monitoring Initiative - Final Report (2016) (PDF, 1MB)

Lake Huron Benthos Survey Cooperative Science and Monitoring Initiative 2017 Final Report (PDF, 1MB)

Lake Ontario Benthos Survey Cooperative Science and Monitoring Initiative 2018 Final Report (PDF, 2MB)

Lake Erie Benthos Survey Cooperative Science and Monitoring Initiative 2019 Final Report (PDF, 3MB)

Lake Michigan Benthos Survey Cooperative Science Monitoring Initiative 2021 Final Report (PDF, 1MB)

Lake Superior Benthos Survey Cooperative Science Monitoring Initiative 2022 Final Report (PDF, 744KB)

GLBMP News